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Gene Expression

 

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I. Introduction
   
     A. Evolution works through natural selection.
   
          1. How does natural selection work?
   
               a. Natural selection works through
                    genetics.
   
     B. Genetics
   
          1. How does genetics work? (How do you
               get a phenotype from a genotype?)
   
               a. Genetics works through gene
                    expression:
   
                    DNA --> RNA --> protein
   
     C. Gene Expression
   
          1. How does gene expression work?
   
               a. DNA is used to make more DNA
                    and DNA is used to make RNA.
   
               b. RNA is used to make proteins.
   
               c. These processes depend on procedures
                    involving complementary base pairing.
   
II. RNA (Ribonucleic Acid)
   
      A. Three Kinds of RNA
   
            1. Messenger RNA [mRNA]
   
            2. Transfer RNA [tRNA]
   
            3. Ribosomal RNA [rRNA]
   
III. The Hereditary Code
   
     A. The Code of Life
   
          1. The sequence of bases on the DNA
               molecule stores genetic information in a
               coded form.
   
          2. This information is transferred to a
               mRNA molecule.
   
          3. The coded information is then used to
               make proteins.
   
               a. Proteins are polymers (chains) of
                    amino acids (about 20 are used).
   
     B. The process is similar to what happens in the
          English language. (Letters make words
          which make sentences that have some
          meaning.)
   
          1. The "Letters" (on DNA and RNA)
   
               a. A, C, G, T and/or U
                    (signifying the nitrogen bases)
   
          2. The "Words" making the "Sentence"
               (on RNA)
   
               a. Codons (Three-Letter "Words")
   
                    i. Triplet Code
   
                         a) Each codon consists of only 3
                              "letters" (bases).
   
                    ii. Each codon (base sequence "word")
                         on the mRNA molecule (the
                         "sentence") stores the information
                         for one of the 20 amino acids (the
                         "meaning of the word") making up
                         the amino acid sequence of a
                         protein (the "meaning of the
                         sentence").
   
                    iii. Degenerate Code
   
                         a) Since 4 letters (bases) taken
                              only 3 at a time can produce
                              64 different "words" (codons),
                              more than 1 codon can specify a
                              particular amino acid.

Codon Table
   
IV. Gene Expression
   
     A. The "Central Dogma"
   
   
          1. DNA is used to make RNA and RNA is
               used to make proteins.
   
               a. Transcription
   
                    i. DNA is used to make RNA.
   
               b. Translation
   
                    i. RNA is used to make proteins.
   
      B. Bad Dogma! Bad!
   
          1. Reverse Transcription
   
   
               a. RNA is used to make DNA and then
                    DNA is used to make RNA and
                    RNA is used to make proteins.
   
V. Transcription
   
     A. Transcription of a Non-Segmented Gene
   
   
     B. Transcription of a Segmented Gene
   
   
          1. Exons
   
          2. Introns ["Junk DNA"]
   
          3. Primary Transcript
   
          4. Editing and Splicing
   
VI. Translation
   
     A. Each codon of the mRNA molecule is "read"
          and the amino acid called for is put into place
          in the forming polypeptide chain.
   
     B. Process
   
          1. Initiation
   
               a. Ribosomes / Polyribosomes
   
               b. tRNA
   
                    i. Anticodon
   
   
               c. mRNA
   
                    i. Initiator Codon (AUG)
   
                         a) Methionine (met)
                              [in eukaryotes]
   
                         b) Formylated Methionine
                              (f-met) [in prokaryotes]
   
                              i) A formyl group is added to
                                   methionine to produce
                                   formylated methionine
                                   (f-met)
   
          2. Elongation
   
               a. More amino acids of the chain are put
                    into place.
   
          3. Termination
   
               a. Termination Codon
                    (UAA, UAG, or UGA)
   
               b. The last amino acid is put into place,
                    the protein chain is edited, and the
                    protein takes on its final shape.
   
VII. Regulation of Gene Expression
   
     A. Structural Genes
   
     B. Regulatory Genes
   
VIII. Summary



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Page obtained from link at URL: http://www.ric.edu/faculty/jmontvilo/109.htm Prepared by Jerome A. Montvilo, Ph.D. for the use of his students. Copyright © by Jerome A. Montvilo. All rights reserved. Please send questions, comments, or suggestions to jmontvilo@ric.edu. Last updated 20 August, 2008